Next Generation Sequencing Services for DECIDER

Helsingin yliopisto

The following services will be purchased (estimated number of analysis per year in parentheses).
Quality control measurement, library preparation and high-throughput sequencing for Whole Genome Sequencing (WGS, ~250 samples), Whole Genome Bisulfite Sequencing (WGBS, ~100 samples), and RNA sequencing (RNA-seq, ~250 samples) services. DNA extraction, quality control measurement, library preparation and high- throughput sequencing of ctDNA samples for whole-genome shallow sequencing (sWGS, ~100 samples), whole-exome sequencing (WES, ~25 samples) and targeted sequencing including at least exonic regions of 200 cancer-specific genes (~5 samples).
The study is part of an ongoing EU project led by Professor Sampsa Hautaniemi at the University of Helsinki. The project builds on existing data received from previous sequencing projects by EU project HERCULES which was produced according to the procedures described in the invitation to tender section VI.4) Other information: ‘Content of the services’, and thus the sequencing data purchased from the service provider should be compatible with these data types (not applicable to ctDNA-specific sequencing).
An agreement for 2 years will be signed of the services. One or many services will be ordered in smaller batches. For each order a separate sub-agreement needs to be prepared and signed to define requested services, number of samples, up-to-date prices and deadline for data delivery.

Määräaika

Tarjousten vastaanottamisen määräaika oli 2021-04-06. Hankinta julkaistiin 2021-03-04.

Toimittajat

Seuraavat toimittajat mainitaan hankintapäätöksissä tai muissa hankinta-asiakirjoissa:

• Novogene UK Company Ltd

Kuka?

• Helsingin yliopisto

Mitä?

• Erilaiset terveyspalvelut › Lääketieteellisten laboratorioiden palvelut

Missä?

• Suomi/Finland › Manner-Suomi

Hankintojen historia

Päivämäärä	Asiakirja
2021-03-04	hankintailmoitus
2021-07-26	Ilmoitus tehdystä sopimuksesta

hankintailmoitus (2021-03-04)
Kohde
Hankinnan laajuus
Otsikko: Lääketieteellisten laboratorioiden palvelut
Lyhyt kuvaus:

The following services will be purchased (estimated number of analysis per year in parentheses). Quality control measurement, library preparation and high-throughput sequencing for Whole Genome Sequencing (WGS, ~250 samples), Whole Genome Bisulfite Sequencing (WGBS, ~100 samples), and RNA sequencing (RNA-seq, ~250 samples) services. DNA extraction, quality control measurement, library preparation and high- throughput sequencing of ctDNA samples for whole-genome shallow sequencing (sWGS, ~100 samples), whole-exome sequencing (WES, ~25 samples) and targeted sequencing including at least exonic regions of 200 cancer-specific genes (~5 samples). The study is part of an ongoing EU project led by Professor Sampsa Hautaniemi at the University of Helsinki. The project builds on existing data received from previous sequencing projects by EU project HERCULES which was produced according to the procedures described in the invitation to tender section VI.4) Other information: ‘Content of the services’, and thus the sequencing data purchased from the service provider should be compatible with these data types (not applicable to ctDNA-specific sequencing). An agreement for 2 years will be signed of the services. One or many services will be ordered in smaller batches. For each order a separate sub-agreement needs to be prepared and signed to define requested services, number of samples, up-to-date prices and deadline for data delivery.

Ilmoituksen metatiedot
Alkukieli: englanti 🗣️
Asiakirjatyyppi: hankintailmoitus
Sopimuksen luonne: Palvelut
Asetus: Euroopan unioni ja WTO-maat
Yhteinen hankintanimikkeistö (CPV)
Koodi: Lääketieteellisten laboratorioiden palvelut 📦
Lisä-CPV-koodi: Lääketieteellisten laboratorioiden palvelut 📦
Suorituspaikka
NUTS-alue: Manner-Suomi 🏙️

Menettely
Menettelyn tyyppi: Avoin menettely
Tarjouksen tyyppi: Tarjous koskee kaikkia eriä
Myöntämisperusteet
Kokonaistaloudellisesti edullisin tarjous

Hankintaviranomainen
Tunnistetiedot
Maa: Suomi 🇫🇮
Hankintaviranomaisen tyyppi: Muu
Hankintaviranomaisen nimi: Helsingin yliopisto
Postiosoite: Yliopistonkatu 3
Postinumero: 00014
Postitoimipaikka: Helsinki
Yhteystiedot
Internetosoite: https://www.helsinki.fi/fi 🌏
Sähköposti: hannele.heinanen@helsinki.fi 📧
Asiakirjojen URL-osoite: https://hanki.tarjouspalvelu.fi/hanki?id=336870&tpk=31f10397-8416-4010-b023-3b05dae01918 🌏
Osallistumisen URL-osoite: https://hanki.tarjouspalvelu.fi/hanki?id=336870&tpk=31f10397-8416-4010-b023-3b05dae01918 🌏

Viite
Päivämäärät
Lähetyspäivä: 2021-03-04 📅
Tarjousten jättämisen määräaika: 2021-04-06 📅
Julkaisupäivä: 2021-03-09 📅
Tunnisteet
Ilmoituksen numero: 2021/S 047-118211
EUVL-S-numero: 47

Kohde
Hankinnan laajuus
Lyhyt kuvaus:

The following services will be purchased (estimated number of analysis per year in parentheses).

Quality control measurement, library preparation and high-throughput sequencing for Whole Genome Sequencing (WGS, ~250 samples), Whole Genome Bisulfite Sequencing (WGBS, ~100 samples), and RNA sequencing (RNA-seq, ~250 samples) services. DNA extraction, quality control measurement, library preparation and high- throughput sequencing of ctDNA samples for whole-genome shallow sequencing (sWGS, ~100 samples), whole-exome sequencing (WES, ~25 samples) and targeted sequencing including at least exonic regions of 200 cancer-specific genes (~5 samples).

The study is part of an ongoing EU project led by Professor Sampsa Hautaniemi at the University of Helsinki. The project builds on existing data received from previous sequencing projects by EU project HERCULES which was produced according to the procedures described in the invitation to tender section VI.4) Other information: ‘Content of the services’, and thus the sequencing data purchased from the service provider should be compatible with these data types (not applicable to ctDNA-specific sequencing).

An agreement for 2 years will be signed of the services. One or many services will be ordered in smaller batches. For each order a separate sub-agreement needs to be prepared and signed to define requested services, number of samples, up-to-date prices and deadline for data delivery.

Arvioitu kokonaisarvo: 850 000 EUR 💰
Osan nimi: Lot 1:Library Preparation and High-throughput Sequencing for Whole-genome, Whole-genome Bisulfite and RNA Sequencing
Osan numero: 1
Lyhyt kuvaus:

Arvioitu arvo ilman arvonlisäveroa: 570 000 EUR 💰
Kesto: 24 kuukautta
EU:n rahoittaman hankkeen tai ohjelman nimi: European Union project DEDICER, grant agreement No 965193.
Osan nimi: Lot 2: DNA Extraction, Quality Control, Library Preparation and High-throughput Sequencing of ctDNA-samples for sWGS, WES and Targeted
Osan numero: 2
Lyhyt kuvaus:

DNA extraction, quality control measurement, library preparation and high- throughput sequencing of ctDNA samples for whole-genome shallow sequencing (sWGS, ~100 samples), whole-exome sequencing (WES, ~25 samples) and targeted sequencing including at least exonic regions of 200 cancer-specific genes (~5 samples).

Arvioitu arvo ilman arvonlisäveroa: 280 000 EUR 💰

Menettely
Oikeusperusta: 32014L0024
Tarjousten vastaanottoaika: 14:00
Kielet, joilla tarjoukset tai osallistumishakemukset voidaan jättää: englanti 🗣️
Tarjouksen voimassaoloaika: 6 kuukautta
Tarjousten avauspäivä: 2021-04-06 📅
Tarjousten avausaika: 14:01

Hankintaviranomainen
Tunnistetiedot
Kansallinen rekisterinumero: 0313471-7
Muu hankintaviranomaisen tyyppi: University
Yhteystiedot
Yhteyspiste: Hannele Heinänen
Asiakirjojen URL-osoite: https://hanki.tarjouspalvelu.fi/hanki?id=336870&tpk=31f10397-8416-4010-b023-3b05dae01918 🌏

Täydentävät tiedot
Arvostelurunko
Nimi: Markkinaoikeus
Postiosoite: Radanrakentajantie 5
Postitoimipaikka: Helsinki
Postinumero: 00520
Maa: Suomi 🇫🇮
Puhelin: +358 295643300 📞
Sähköposti: markkinaoikeus@oikeus.fi 📧
Internetosoite: http://www.oikeus.fi/markkinaoikeus 🌏
Lähde: OJS 2021/S 047-118211 (2021-03-04)

Ilmoitus tehdystä sopimuksesta (2021-07-26)
Kohde
Hankinnan laajuus
Lyhyt kuvaus:

The following services will be purchased (estimated number of analysis per year in parentheses). Quality control measurement, library preparation and high-throughput sequencing for Whole Genome Sequencing (WGS, ~250 samples), Whole Genome Bisulfite Sequencing (WGBS, ~100 samples), and RNA sequencing (RNA-seq, ~250 samples) services. DNA extraction, quality control measurement, library preparation and high- throughput sequencing of ctDNA samples for whole-genome shallow sequencing (sWGS, ~100 samples), whole-exome sequencing (WES, ~25 samples) and targeted sequencing including at least exonic regions of 200 cancer-specific genes (~5 samples). The study is part of an ongoing EU project led by Professor Sampsa Hautaniemi at the University of Helsinki. The project builds on existing data received from previous sequencing projects by EU project Hercules which was produced according to the procedures described in the invitation to tender section VI.4) Other information: ‘Content of the services’, and thus the sequencing data purchased from the service provider should be compatible with these data types (not applicable to ctDNA-specific sequencing). An agreement for 2 years will be signed of the services. One or many services will be ordered in smaller batches. For each order a separate sub-agreement needs to be prepared and signed to define requested services, number of samples, up-to-date prices and deadline for data delivery.

Hankinnan kokonaisarvo: 850 000 EUR 💰
Ilmoituksen metatiedot
Asiakirjatyyppi: Ilmoitus tehdystä sopimuksesta
Suorituspaikka
NUTS-alue: Helsinki-Uusimaa 🏙️

Menettely
Tarjouksen tyyppi: Ei sovelleta

Hankintaviranomainen
Tunnistetiedot
Postitoimipaikka: Helsingin yliopisto

Viite
Päivämäärät
Lähetyspäivä: 2021-07-26 📅
Julkaisupäivä: 2021-07-30 📅
Tunnisteet
Ilmoituksen numero: 2021/S 146-388123
Viittaa ilmoitukseen: 2021/S 047-118211
EUVL-S-numero: 146

Kohde
Hankinnan laajuus
Lyhyt kuvaus:

The study is part of an ongoing EU project led by Professor Sampsa Hautaniemi at the University of Helsinki. The project builds on existing data received from previous sequencing projects by EU project Hercules which was produced according to the procedures described in the invitation to tender section VI.4) Other information: ‘Content of the services’, and thus the sequencing data purchased from the service provider should be compatible with these data types (not applicable to ctDNA-specific sequencing).

Osan nimi: Lot 1. Library Preparation and High-throughput Sequencing for Whole-genome, Whole-genome Bisulfite and RNA Sequencing
EU:n rahoittaman hankkeen tai ohjelman nimi: European Union project Dedicer, grant agreement no 965193.
Osan nimi: Lot 2. DNA Extraction, Quality Control, Library Preparation and High-throughput Sequencing of ctDNA-samples for sWGS, WES and Targeted

Menettely
Myöntämisperusteet
Laatukriteeri (nimi): Laatu
Laatukriteeri (painotus): 60
Hinta (painotus): 40

Sopimuksen tekeminen
Sopimuksen tekemispäivä: 2021-06-23 📅
Nimi: Novogene UK Company Ltd
Kansallinen rekisterinumero: GB273975163
Postiosoite: Second Floor, Cambridge Science Park, 25 Milton Road, Cambridge
Postitoimipaikka: CB4 0FW
Postinumero: CB4 0FW
Maa: Iso-Britannia 🇬🇧
Hankinnan kokonaisarvo: 569 998 EUR 💰
280 000 EUR 💰
Tietoa tarjouskilpailuista
Saatujen tarjousten määrä: 3
Lähde: OJS 2021/S 146-388123 (2021-07-26)

Uudet hankinnat asiaan liittyvissä luokissa 🆕

Terveyspalvelut ja sosiaalitoimen palvelut (20 uudet hankinnat)

Terveyspalvelut (9)

Erilaiset terveyspalvelut (5)